Sequence Similarity Clusters for the Entities in PDB 4KI4

Entity #1 | Chains: A
DNA polymerase protein, length: 903 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 7574
95 % 83 120 221 Flexibility: Medium
Max RMSD: 7.3, Avg RMSD: 3.3
PDBFlex
90 % 83 120 229
70 % 83 120 260
50 % 83 120 277
40 % 83 120 298
30 % 83 120 305
Entity #2 | Chains: T
DNA/RNA (5'-D(*AP*C)-R(P*AP*G)-D(P*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3') hybrid, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: P
DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3') dna, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.