Sequence Similarity Clusters for the Entities in PDB 4KI2

Entity #1 | Chains: D,E,F,G
DNA (5'-D(*TP*GP*TP*AP*CP*AP*AP*TP*GP*GP*G)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
RNA polymerase sigma factor protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 10890
95 % 4 4 10614
90 % 4 4 10468
70 % 4 4 9899
50 % 4 4 8928
40 % 4 4 8137
30 % 4 4 7145

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.