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An Information Portal to 105097 Biological Macromolecular Structures

Ternary complex of rb69 mutant L415F with a ribonucleotide at -1 position
Sequence Clustering and Redundancy Reduction Results
4KHU
Sequence Clusters for the Sequence Entities in PDB 4KHU
Entity #1: Chains: A - DNA polymerase protein, length: 903 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 8 5541
95% 58 119 97
90% 58 119 105
70% 58 119 129
50% 58 119 177
40% 58 119 206
30% 58 119 224
Entity #2: Chains: T - DNA/RNA (5'-D(*AP*CP*A)-R(P*G)-D(P*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3') hybrid, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: P - DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3') dna, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.