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Ternary complex of RB69 mutant L415F with a ribonucleotide at 0 position
Sequence Clustering and Redundancy Reduction Results
4KHS
Cluster # 5603 Members. Sequence cutoff: 100% Cluster size: 8 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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  Download      Details  
1 4KHS 1 A DNA polymerase 12353   2.7.7.7   
2 4KHU 1 A DNA polymerase 12353   2.7.7.7   
3 4KHQ 1 A DNA polymerase 12353   2.7.7.7   
4 4KHW 1 A DNA polymerase 12353   2.7.7.7   
5 4KHY 1 A DNA polymerase 12353   2.7.7.7   
6 4KI4 1 A DNA polymerase 12353   2.7.7.7   
7 4KI6 1 A DNA polymerase 12353   2.7.7.7   
8 3CQ8 3 A DNA polymerase RB69 polymerase 12353   2.7.7.7   
 
Sequence Clusters for the Sequence Entities in PDB 4KHS
Entity #1: Chains: A - DNA polymerase protein, length: 903 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 8 5603
95% 54 119 118
90% 54 119 127
70% 54 119 147
50% 54 119 184
40% 54 119 211
30% 54 119 228
Entity #2: Chains: P - DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3') dna, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: T - DNA/RNA (5'-D(*AP*C)-R(P*A)-D(P*GP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3') hybrid, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.