Sequence Similarity Clusters for the Entities in PDB 4KDP

Entity #1 | Chains: A,B,C,D,E,F,G
TcaR transcription regulator protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 11 1410
95 % 11 11 1895
90 % 11 11 1939
70 % 11 11 1970
50 % 11 11 1985
40 % 11 11 1993
30 % 11 11 1912
Entity #2 | Chains: H,J
DNA (5'-D(*CP*GP*CP*AP*GP*CP*GP*CP*GP*CP*AP*GP*CP*CP*CP*TP*A)-3') dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.