POP-OUT | CLOSE

An Information Portal to 105212 Biological Macromolecular Structures

TcaR-ssDNA complex crystal structure reveals the novel ssDNA binding mechanism of the MarR family proteins
Sequence Clustering and Redundancy Reduction Results
4KDP
Sequence Clusters for the Sequence Entities in PDB 4KDP
Entity #1: Chains: A,B,C,D,E,F,G - TcaR transcription regulator protein, length: 151 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 11 11 1158
95% 11 11 1566
90% 11 11 1610
70% 11 11 1640
50% 11 11 1675
40% 11 11 1706
30% 11 11 1644
Entity #2: Chains: H,J - DNA (5'-D(*CP*GP*CP*AP*GP*CP*GP*CP*GP*CP*AP*GP*CP*CP*CP*TP*A)-3') dna, length: 17 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.