Sequence Similarity Clusters for the Entities in PDB 4K9B

Entity #1 | Chains: A
Cyclic GMP-AMP synthase protein, length: 362 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 2344
95 % 7 11 2980 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.3
PDBFlex
90 % 7 11 3030
70 % 12 21 1606
50 % 12 21 1641
40 % 12 21 1657
30 % 12 21 1625
Entity #2 | Chains: D
DNA-F dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: E
DNA-R dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.