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Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pG(2 ,5 )pA
Sequence Clustering and Redundancy Reduction Results
4K9A
Cluster # 1366 Members. Sequence cutoff: 40% Cluster size: 20 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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1 4K98 1 A Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
2 4O6A 1 A, B Cyclic GMP-AMP synthase UNP residues 147-507 10090   2.7.7.86   
3 4LEV 1 A, B Cyclic GMP-AMP synthase human cGAS catalytic domain, UNP residues 157-522 9606   2.7.7.86   
4 4K99 1 A Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
5 4K8V 1 A, B, C, D Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
6 4LEW 1 A, B Cyclic GMP-AMP synthase Catalytic domain, UNP residues 157-522 9606   2.7.7.86   
7 4JLX 1 A Uncharacterized protein UNP residues 135-495 9823   2.7.7.86   
8 4MKP 1 A Cyclic GMP-AMP synthase UNP residues 161-522 9606   2.7.7.86   
9 4K96 1 A, B Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
10 4K9A 1 A Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
11 4JLZ 1 A, B Uncharacterized protein UNP residues 135-495 9823   2.7.7.86   
12 4K9B 1 A Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
13 4O69 1 A Cyclic GMP-AMP synthase 9606   2.7.7.86   
14 4LEY 1 A, B, C, D Cyclic GMP-AMP synthase Catalytic domain, UNP residues 142-507 10090   2.7.7.86   
15 4LEZ 1 A, C Cyclic GMP-AMP synthase mouse cGAS catalytic domain, UNP residues 142-507 10090   2.7.7.86   
16 4O68 1 A Cyclic GMP-AMP synthase UNP residues 147-522 9606   2.7.7.86   
17 4K97 1 A Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
18 4O67 1 A, B Cyclic GMP-AMP synthase UNP residues 161-522 9606   2.7.7.86   
19 4KM5 1 A Cyclic GMP-AMP synthase UNP residues 157-522 9606   2.7.7.86   
20 4KB6 1 A Uncharacterized protein UNP Residues 135-495 9823   2.7.7.86   
 
Sequence Clusters for the Sequence Entities in PDB 4K9A
Entity #1: Chains: A - Cyclic GMP-AMP synthase protein, length: 362 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 10 1879
95% 6 10 2405
90% 6 10 2432
70% 10 20 1282
50% 10 20 1341
40% 10 20 1366
30% 10 20 1353
Entity #2: Chains: D - DNA-F dna, length: 17 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: E - DNA-R dna, length: 17 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.