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Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pG(2 ,5 )pA
Sequence Clustering and Redundancy Reduction Results
4K9A
Cluster # 1879 Members. Sequence cutoff: 100% Cluster size: 10 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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1 4K98 1 A Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
2 4O6A 1 A, B Cyclic GMP-AMP synthase UNP residues 147-507 10090   2.7.7.86   
3 4K99 1 A Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
4 4K8V 1 A, B, C, D Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
5 4K96 1 A, B Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
6 4K9A 1 A Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
7 4K9B 1 A Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
8 4LEY 1 A, B, C, D Cyclic GMP-AMP synthase Catalytic domain, UNP residues 142-507 10090   2.7.7.86   
9 4LEZ 1 A, C Cyclic GMP-AMP synthase mouse cGAS catalytic domain, UNP residues 142-507 10090   2.7.7.86   
10 4K97 1 A Cyclic GMP-AMP synthase C-TERMINAL DOMAIN, UNP residues 147-507 10090   2.7.7.86   
 
Sequence Clusters for the Sequence Entities in PDB 4K9A
Entity #1: Chains: A - Cyclic GMP-AMP synthase protein, length: 362 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 10 1879
95% 6 10 2405
90% 6 10 2432
70% 10 20 1282
50% 10 20 1341
40% 10 20 1366
30% 10 20 1353
Entity #2: Chains: D - DNA-F dna, length: 17 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: E - DNA-R dna, length: 17 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.