Sequence Similarity Clusters for the Entities in PDB 4K80

Entity #1 | Chains: A
Glycolipid transfer protein domain-containing protein 1 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 2898
95 % 4 6 3235 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 4 6 3295
70 % 4 7 2264
50 % 4 7 2267
40 % 4 7 2227
30 % 4 7 2105

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures