Sequence Similarity Clusters for the Entities in PDB 4K67

Entity #1 | Chains: A,C,E,G
Hemagglutinin protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4699
95 % 48 64 152 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 0.9
PDBFlex
90 % 53 71 153
70 % 60 85 157
50 % 98 160 80
40 % 192 307 16
30 % 195 314 26
Entity #2 | Chains: B,D,F,H
Hemagglutinin protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 1937
95 % 55 75 144 Flexibility: Low
Max RMSD: 6.7, Avg RMSD: 1.1
PDBFlex
90 % 60 86 137
70 % 97 161 44
50 % 192 305 11
40 % 196 315 15
30 % 196 315 27

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.