Sequence Similarity Clusters for the Entities in PDB 4K62

Entity #1 | Chains: A,C,E,G
Hemagglutinin protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4790
95 % 34 64 153 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 0.9
PDBFlex
90 % 38 71 153
70 % 44 85 157
50 % 81 167 78
40 % 161 321 16
30 % 164 328 25
Entity #2 | Chains: B,D,F,H
Hemagglutinin protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 1963
95 % 39 75 144 Flexibility: Low
Max RMSD: 6.7, Avg RMSD: 1.1
PDBFlex
90 % 44 86 138
70 % 79 168 42
50 % 161 319 10
40 % 165 329 15
30 % 165 329 27

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.