Sequence Similarity Clusters for the Entities in PDB 4K62

Entity #1 | Chains: A,C,E,G
Hemagglutinin protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4867
95 % 34 64 156 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 0.9
PDBFlex
90 % 38 71 157
70 % 44 85 162
50 % 84 173 78
40 % 165 328 17
30 % 168 335 27
Entity #2 | Chains: B,D,F,H
Hemagglutinin protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 1999
95 % 39 75 148 Flexibility: Low
Max RMSD: 6.7, Avg RMSD: 1.1
PDBFlex
90 % 44 86 141
70 % 82 173 30
50 % 164 324 10
40 % 168 334 16
30 % 168 334 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.