Sequence Similarity Clusters for the Entities in PDB 4K50

Entity #1 | Chains: A,E,I,M
RNA polymerase 3D-POL protein, length: 460 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 7811
95 % 3 3 6569
90 % 3 3 6547
70 % 4 4 5999
50 % 60 70 469
40 % 60 70 501
30 % 78 99 340
Entity #2 | Chains: B,F,J,N
RNA (33-MER) rna, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,G,K,O
RNA (5'-R(P*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3') rna, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.