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Coxsackievirus B3 polymerase elongation complex (r2+1_form)
Sequence Clustering and Redundancy Reduction Results
4K4Y
Sequence Clusters for the Sequence Entities in PDB 4K4Y
Entity #1: Chains: A,E,I,M - Polyprotein protein, length: 472 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 2699
95% 9 9 2468
90% 9 9 2503
70% 31 42 442
50% 35 51 389
40% 35 51 410
30% 42 70 327
Entity #2: Chains: B,F,J,N - RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3') rna, length: 24 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C,G,K,O - DNA/RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(DOC))-3') hybrid, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: D,H,L,P - RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3') rna, length: 9 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.