POP-OUT | CLOSE

An Information Portal to 110790 Biological Macromolecular Structures

Coxsackievirus B3 polymerase elongation complex (r2_form), rna
Sequence Clustering and Redundancy Reduction Results
4K4X
Sequence Clusters for the Sequence Entities in PDB 4K4X
Entity #1: Chains: A,E,I,M - RNA-dependent RNA polymerase protein, length: 472 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 6 2722
95% 8 11 2354
90% 8 11 2382
70% 18 45 452
50% 18 54 403
40% 18 54 431
30% 25 80 314
Entity #2: Chains: B,F,J,N - RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3') rna, length: 24 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C,G,K,O - RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3') rna, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: D,H,L,P - RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*A)-3') rna, length: 9 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.