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Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon
Sequence Clustering and Redundancy Reduction Results
4K0L
Cluster # 40 Members. Sequence cutoff: 95% Cluster size: 268 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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1 1AN7 1 A, B RIBOSOMAL PROTEIN S8 274  
2 4RB5 8 H 30S Ribosomal Protein S8 300852  
3 4RB7 8 H 30S Ribosomal Protein S8 300852  
4 4RB9 8 H 30S Ribosomal Protein S8 300852  
5 4RBB 8 H 30S Ribosomal Protein S8 300852  
6 4LFB 8 H ribosomal protein S8 300852  
7 4QCM 8 H 30S ribosomal protein S8 300852  
8 4QCO 8 H 30S ribosomal protein S8 300852  
9 4RBH 8 H 30S Ribosomal Protein S8 300852  
10 4RBJ 8 H 30S Ribosomal Protein S8 300852  
11 4QCQ 8 H 30S ribosomal protein S8 300852  
12 4QCS 8 H 30S ribosomal protein S8 300852  
13 4RBD 8 H 30S Ribosomal Protein S8 300852  
14 4RBF 8 H 30S Ribosomal Protein S8 300852  
15 3V2C 8 H 30S Ribosomal Protein S8 274  
16 3V2E 8 H 30S Ribosomal Protein S8 274  
17 4JI1 8 H RIBOSOMAL PROTEIN S8 300852  
18 4DR6 8 H 30S ribosomal protein S8 300852  
19 4LF7 8 H ribosomal protein S8 300852  
20 4LF8 8 H ribosomal protein S8 300852  
21 2VQE 8 H 30S RIBOSOMAL PROTEIN S8 300852  
22 2UUB 8 H 30S RIBOSOMAL PROTEIN S8 300852  
23 4DV6 8 H ribosomal protein S8 300852  
24 4JYA 8 H 30S ribosomal protein S8 300852  
25 4DR5 8 H 30S ribosomal protein S8 300852  
26 4KHP 8 H 30S Ribosomal protein S8 300852  
27 4DR2 8 H 30S ribosomal protein S8 300852  
28 4LF9 8 H ribosomal protein S8 300852  
29 4DUY 8 H ribosomal protein S8 300852  
30 4DV7 8 H ribosomal protein S8 300852  
31 4JUW 21 H 30S ribosomal protein S8 300852  
32 3UZ6 8 K 30S RIBOSOMAL PROTEIN S8 300852  
33 3UZ7 8 K 30S RIBOSOMAL PROTEIN S8 300852  
34 4DR3 8 H 30S ribosomal protein S8 300852  
35 4CR1 8 H 30S RIBOSOMAL PROTEIN S8 300852  
36 4JI3 8 H RIBOSOMAL PROTEIN S8 300852  
37 4JI6 8 H RIBOSOMAL PROTEIN S8 300852  
38 4JI8 8 H RIBOSOMAL PROTEIN S8 300852  
39 2UXC 8 H RIBOSOMAL PROTEIN S8 300852  
40 4NVU 8 H 30S Ribosomal Protein S8 274  
41 4NVW 8 H 30S Ribosomal Protein S8 274  
42 4B3M 8 H 30S RIBOSOMAL PROTEIN S8 300852  
43 4LF4 8 H ribosomal protein S8 300852  
44 4LF6 8 H ribosomal protein S8 300852  
45 4JI7 8 H RIBOSOMAL PROTEIN S8 300852  
46 4B3T 8 H 30S RIBOSOMAL PROTEIN S8 300852  
47 3UYD 8 K 30S RIBOSOMAL PROTEIN S8 300852  
48 3UYF 8 K 30S RIBOSOMAL PROTEIN S8 300852  
49 2VQF 8 H 30S RIBOSOMAL PROTEIN S8 300852  
50 2UUA 8 H 30S RIBOSOMAL PROTEIN S8 300852  
51 3TVF 8 K 30S RIBOSOMAL PROTEIN S8 300852  
52 3TVG 8 K 30S RIBOSOMAL PROTEIN S8 300852  
53 4DH9 8 H 30S Ribosomal Protein S8 274  
54 4DHB 8 H 30S Ribosomal Protein S8 274  
55 4QCY 8 H 30S ribosomal protein S8 300852  
56 4QD0 8 H 30S ribosomal protein S8 300852  
57 4B3R 8 H 30S RIBOSOMAL PROTEIN S8 300852  
58 1VX8 8 H 30S ribosomal protein S8 300852  
59 1VXI 8 H 30S ribosomal protein S8 300852  
60 4DR1 8 H 30S ribosomal protein S8 300852  
61 4LFA 8 H ribosomal protein S8 300852  
62 4DV4 8 H ribosomal protein S8 300852  
63 4JI0 8 H ribosomal protein S8 300852  
64 4NVY 8 H 30S Ribosomal Protein S8 274  
65 4NW0 8 H 30S Ribosomal Protein S8 274  
66 4JI2 8 H RIBOSOMAL PROTEIN S8 300852  
67 4JV5 8 H 30S ribosomal protein S8 300852  
68 4DR7 8 H 30S ribosomal protein S8 300852  
69 1J5E 8 H 30S RIBOSOMAL PROTEIN S8 274  
70 4GKK 8 H 30S ribosomal protein S8 300852  
71 4DUZ 8 H ribosomal protein S8 300852  
72 3V22 8 H 30S Ribosomal Protein S8 300852  
73 3V24 8 H 30S ribosomal protein S8 300852  
74 4GKJ 8 H 30S ribosomal protein S8 300852  
75 4DV3 8 H ribosomal protein S8 300852  
76 4DV5 8 H ribosomal protein S8 300852  
77 2UUC 8 H 30S RIBOSOMAL PROTEIN S8 300852  
78 4LFC 8 H ribosomal protein S8 300852  
79 1FJG 9 H 30S RIBOSOMAL PROTEIN S8 274  
80 3T1Y 8 H 30S ribosomal protein S8 300852  
81 4JI4 8 H RIBOSOMAL PROTEIN S8 300852  
82 4QCU 8 H 30S ribosomal protein S8 300852  
83 4QCW 8 H 30S ribosomal protein S8 300852  
84 1XMQ 10 H 30S Ribosomal Protein S8 274  
85 4DV0 8 H ribosomal protein S8 300852  
86 4G5T 8 K 30S RIBOSOMAL PROTEIN S8 300852  
87 4G5V 8 K 30S RIBOSOMAL PROTEIN S8 300852  
88 3I8G 8 K 30S ribosomal protein S8 300852  
89 3I8H 8 K 30S ribosomal protein S8 300852  
90 3UZL 8 K 30S RIBOSOMAL PROTEIN S8 300852  
91 3UZM 8 K 30S RIBOSOMAL PROTEIN S8 300852  
92 4B3S 8 H 30S RIBOSOMAL PROTEIN S8 300852  
93 4DV2 8 H ribosomal protein S8 300852  
94 4DV1 8 H ribosomal protein S8 300852  
95 1N32 10 H 30S RIBOSOMAL PROTEIN S8 274  
96 3V26 8 H 30S Ribosomal Protein S8 300852  
97 3V28 8 H 30S Ribosomal Protein S8 300852  
98 4JI5 8 H RIBOSOMAL PROTEIN S8 300852  
99 4K0K 8 H 30S ribosomal protein S8 300852  
100 3UZ3 8 K 30S RIBOSOMAL PROTEIN S8 300852  
101 3UZ4 8 K 30S RIBOSOMAL PROTEIN S8 300852  
102 4QJT 9 h 30S ribosomal protein S8 300852  
103 4LF5 8 H ribosomal protein S8 300852  
104 4G5K 8 K 30S RIBOSOMAL PROTEIN S8 300852  
105 4G5M 8 K 30S RIBOSOMAL PROTEIN S8 300852  
106 2X9R 8 H 30S RIBOSOMAL PROTEIN S8 300852  
107 2X9T 8 H 30S RIBOSOMAL PROTEIN S8 300852  
108 3OHY 8 H 30S ribosomal protein S8 300852  
109 3OI0 8 H 30S ribosomal protein S8 300852  
110 3UZG 8 K 30S RIBOSOMAL PROTEIN S8 300852  
111 3UZI 8 K 30S RIBOSOMAL PROTEIN S8 300852  
112 4DR4 8 H 30S ribosomal protein S8 300852  
113 3OTO 8 H 30S RIBOSOMAL PROTEIN S8 300852  
114 2UU9 8 H 30S RIBOSOMAL PROTEIN S8 300852  
115 4ABR 9 H 30S RIBOSOMAL PROTEIN S8 300852  
116 1HR0 9 H 30S RIBOSOMAL PROTEIN S8 274  
117 4AQY 8 H 30S RIBOSOMAL PROTEIN S8 274  
118 4NXM 8 H ribosomal protein S8 300852  
119 2XQD 8 H 30S RIBOSOMAL PROTEIN S8 300852  
120 3OHC 8 H 30S ribosomal protein S8 300852  
121 3OHD 8 H 30S ribosomal protein S8 300852  
122 1IBL 11 H 30S RIBOSOMAL PROTEIN S8 274  
123 3OGE 8 H 30S ribosomal protein S8 300852  
124 3OGY 8 H 30S ribosomal protein S8 300852  
125 4NXN 8 H ribosomal protein S8 300852  
126 1XNR 10 H 16S Ribosomal protein S8 274  
127 1VXP 8 H 30S ribosomal protein S8 300852  
128 1VXS 8 H 30S ribosomal protein S8 300852  
129 2J00 8 H 30S RIBOSOMAL PROTEIN S8 300852  
130 2J02 8 H 30S RIBOSOMAL PROTEIN S8 300852  
131 3KNH 8 H 30S ribosomal protein S8 300852  
132 2Y10 8 H 30S RIBOSOMAL PROTEIN S8 300852  
133 2Y18 8 H 30S RIBOSOMAL PROTEIN S8 300852  
134 1HNZ 9 H 30S RIBOSOMAL PROTEIN S8 274  
135 1XNQ 10 H Ribosomal protein S8 274  
136 3UXS 8 H 30S ribosomal protein S8 300852  
137 3UXT 8 H 30S ribosomal protein S8 300852  
138 2XG1 8 H 30S RIBOSOMAL PROTEIN S8 300852  
139 2XFZ 8 H 30S RIBOSOMAL PROTEIN S8 300852  
140 2Y0Y 8 H 30S RIBOSOMAL PROTEIN S8 300852  
141 2Y12 8 H 30S RIBOSOMAL PROTEIN S8 300852  
142 3KIQ 7 h 30S ribosomal protein S8 300852  
143 3KIS 7 h 30S ribosomal protein S8 300852  
144 2WDG 8 H 30S RIBOSOMAL PROTEIN S8 300852  
145 2WDH 8 H 30S RIBOSOMAL PROTEIN S8 300852  
146 2WH1 8 H 30S RIBOSOMAL PROTEIN S8 300852  
147 2WH3 8 H 30S RIBOSOMAL PROTEIN S8 300852  
148 1VVL 8 H 30S ribosomal protein S8 300852  
149 1VVN 8 H 30S ribosomal protein S8 300852  
150 2Y0U 8 H 30S RIBOSOMAL PROTEIN S8 300852  
151 2Y0W 8 H 30S RIBOSOMAL PROTEIN S8 300852  
152 2WDK 8 H 30S RIBOSOMAL PROTEIN S8 300852  
153 2WDM 8 H 30S RIBOSOMAL PROTEIN S8 300852  
154 3OI2 8 H 30S ribosomal protein S8 300852  
155 3OI4 8 H 30S ribosomal protein S8 300852  
156 4BYB 8 H 30S RIBOSOMAL PROTEIN S8 300852  
157 4BYD 8 H 30S RIBOSOMAL PROTEIN S8 300852  
158 2Y14 8 H 30S RIBOSOMAL PROTEIN S8 300852  
159 2Y16 8 H 30S RIBOSOMAL PROTEIN S8 300852  
160 4K0L 8 H 30S Ribosomal protein S8 300852  
161 4K0P 8 H 30S Ribosomal protein S8 300852  
162 1XMO 10 H 30S ribosomal protein S8 274  
163 3T1H 8 H 30S ribosomal protein S8 300852  
164 2UXD 8 H RIBOSOMAL PROTEIN S8 300852  
165 1N33 10 H 30S RIBOSOMAL PROTEIN S8 274  
166 1IBK 9 H 30S RIBOSOMAL PROTEIN S8 274  
167 3I9B 8 K 30S RIBOSOMAL PROTEIN S8 300852  
168 3I9D 8 K 30S ribosomal protein S8 300852  
169 3ZN7 8 H 30S RIBOSOMAL PROTEIN S8 300852  
170 3ZND 8 H 30S RIBOSOMAL PROTEIN S8 300852  
171 4EJ9 8 H 30S ribosomal protein S8 300852  
172 4EJA 8 H 30S ribosomal protein S8 300852  
173 1HNW 9 H 30S RIBOSOMAL PROTEIN S8 274  
174 3KNL 8 H 30S ribosomal protein S8 300852  
175 3KNN 8 H 30S ribosomal protein S8 300852  
176 1IBM 11 H 30S RIBOSOMAL PROTEIN S8 274  
177 3HUW 8 H 30S ribosomal protein S8 300852  
178 3HUY 8 H 30S ribosomal protein S8 300852  
179 3KNJ 8 H 30S ribosomal protein S8 300852  
180 3PYS 8 H 30S ribosomal protein S8 262724  
181 3PYU 8 H 30S ribosomal protein S8 262724  
182 3KIU 7 h 30S ribosomal protein S8 300852  
183 3KIX 7 h 30S ribosomal protein S8 300852  
184 1HNX 9 H 30S RIBOSOMAL PROTEIN S8 274  
185 4L6K 8 H 30S ribosomal protein S8 262724  
186 4L6M 8 H 30S ribosomal protein S8 262724  
187 4KFH 11 H 30S ribosomal protein S8 262724  
188 4KFK 11 H 30S ribosomal protein S8 262724  
189 1VY0 8 H 30S ribosomal protein S8 300852  
190 1VY2 8 H 30S ribosomal protein S8 300852  
191 4B8F 8 H 30S RIBOSOMAL PROTEIN S8 300852  
192 4B8H 8 H 30S RIBOSOMAL PROTEIN S8 300852  
193 1VXK 8 H 30S ribosomal protein S8 300852  
194 1VXM 8 H 30S ribosomal protein S8 300852  
195 4W2A 8 I 30S ribosomal protein S8 300852  
196 4W2C 8 I 30S ribosomal protein S8 300852  
197 3F1E 10 H 30S ribosomal protein S8 274  
198 3F1G 10 H 30S ribosomal protein S8 274  
199 3PYN 8 H 30S ribosomal protein S8 262724  
200 3PYQ 8 H 30S ribosomal protein S8 262724  
201 2WRI 8 H 30S RIBOSOMAL PROTEIN S8 300852  
202 2WRK 8 H 30S RIBOSOMAL PROTEIN S8 300852  
203 4KWZ 8 H 30S ribosomal protein S8 300852  
204 4KX1 8 H 30S ribosomal protein S8 300852  
205 1VVX 8 H 30S ribosomal protein S8 300852  
206 1VVZ 8 H 30S ribosomal protein S8 300852  
207 2E5L 9 H 30S ribosomal protein S8 274  
208 2HHH 8 H 30S ribosomal protein S8 300852  
209 4OX9 8 H 30S ribosomal protein S8 300852  
210 2UXB 8 H RIBOSOMAL PROTEIN S8 300852  
211 4KCY 7 H 30S ribosomal protein S8 262724  
212 1N34 9 H 30S RIBOSOMAL PROTEIN S8 274  
213 4KD0 7 H 30S ribosomal protein S8 262724  
214 2V46 8 H 30S RIBOSOMAL PROTEIN S8 300852  
215 2V48 8 H 30S RIBOSOMAL PROTEIN S8 300852  
216 3D5A 10 H 30S ribosomal protein S8 262724  
217 3D5C 10 H 30S ribosomal protein S8 262724  
218 1VVP 8 H 30S ribosomal protein S8 300852  
219 1VVR 8 H 30S ribosomal protein S8 300852  
220 4KVB 8 H 30S ribosomal protein S8 262724  
221 3MR8 8 H 30S ribosomal protein S8 262724  
222 3MS0 8 H 30S ribosomal protein S8 262724  
223 3V6U 8 H 30S ribosomal protein S8 300852  
224 3V6V 8 H 30S ribosomal protein S8 300852  
225 1N36 8 H 30S RIBOSOMAL PROTEIN S8 274  
226 2ZM6 8 H 30S ribosomal protein S8 274  
227 1VVT 8 H 30S ribosomal protein S8 300852  
228 1VVV 8 H 30S ribosomal protein S8 300852  
229 2F4V 9 H 30S ribosomal protein S8 274  
230 4KD8 7 H 30S ribosomal protein S8 262724  
231 4KDA 7 H 30S ribosomal protein S8 262724  
232 1FKA 8 H 30S RIBOSOMAL PROTEIN S8 274  
233 2WRN 8 H 30S RIBOSOMAL PROTEIN S8 300852  
234 2WRQ 8 H 30S RIBOSOMAL PROTEIN S8 300852  
235 4KBT 7 H 30S ribosomal protein S8 262724  
236 4KBV 7 H 30S ribosomal protein S8 262724  
237 3ZVO 8 H 30S RIBOSOMAL PROTEIN S8 300852  
238 4KDG 7 H 30S ribosomal protein S8 262724  
239 4KDJ 7 H 30S ribosomal protein S8 262724  
240 4QS0 7 H 30S ribosomal protein S8 262724  
241 4QS2 7 H 30S ribosomal protein S8 262724  
242 2HGP 10 K 30S ribosomal protein S8 300852  
243 2QNH 11 i 30S ribosomal protein S8 262724  
244 2HGI 10 K 30S ribosomal protein S8 300852  
245 2HGR 11 K 30S ribosomal protein S8 300852  
246 2OW8 11 i 30S ribosomal protein S8 262724  
247 1YL4 10 K 30S ribosomal protein S8 300852  
248 2B64 11 H 30S ribosomal protein S8 300852  
249 2B9M 11 H 30S ribosomal protein S8 300852  
250 2B9O 11 H 30S ribosomal protein S8 300852  
251 1PNS 10 H 30S ribosomal protein S8 562  
252 1PNX 8 H 30S ribosomal protein S8 562  
253 1VOQ 8 H 30S ribosomal protein S8 562  
254 1VOS 8 H 30S ribosomal protein S8 562  
255 1VOV 8 H 30S ribosomal protein S8 562  
256 1VOX 8 H 30S ribosomal protein S8 562  
257 1VOZ 8 H 30S ribosomal protein S8 562  
258 2XUY 8 H 30S RIBOSOMAL PROTEIN S8 300852  
259 2XSY 8 H 30S RIBOSOMAL PROTEIN S8 300852  
260 3FIC 6 H 30S ribosomal protein S8 274  
261 1ML5 13 K 30S RIBOSOMAL PROTEIN S8 562  
262 1JGO 11 K 30S RIBOSOMAL PROTEIN S8 274  
263 1JGP 11 K 30S RIBOSOMAL PROTEIN S8 274  
264 1JGQ 11 K 30S RIBOSOMAL PROTEIN S8 274  
265 1GIX 11 K 30S RIBOSOMAL PROTEIN S8 274  
266 1EMI 2 A RIBOSOMAL PROTEIN S8 274  
267 1EG0 9 E PROTEIN (S8 RIBOSOMAL PROTEIN) MODELED BY ANALOGOUS PROTEIN OF T. THERMOPHILUS TAKEN FROM PDB ENTRY 1AN7 562  
268 1QD7 7 G S8 RIBOSOMAL PROTEIN 274  
 
Sequence Clusters for the Sequence Entities in PDB 4K0L
Entity #1: Chains: A - 16S ribosomal RNA rna, length: 1504 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #10: Chains: J - 30S Ribosomal protein S10 protein, length: 98 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 158 265 27
95% 160 267 47
90% 160 267 49
70% 160 267 59
50% 207 384 34
40% 207 384 46
30% 207 389 65
Entity #11: Chains: K - 30S Ribosomal protein S11 protein, length: 119 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 268 25
95% 160 268 43
90% 160 268 45
70% 160 268 55
50% 201 378 41
40% 239 454 34
30% 239 454 44
Entity #12: Chains: L - 30S Ribosomal protein S12 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 123 237 35
95% 160 275 35
90% 160 275 37
70% 201 390 24
50% 201 390 33
40% 201 390 45
30% 201 390 68
Entity #13: Chains: M - 30S Ribosomal protein S13 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 269 22
95% 160 269 41
90% 160 269 43
70% 160 269 53
50% 201 380 38
40% 201 380 51
30% 237 452 47
Entity #14: Chains: N - 30S Ribosomal protein S14 protein, length: 60 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 267 26
95% 160 267 48
90% 160 267 50
70% 160 267 60
50% 160 267 94
40% 160 267 119
30% 160 267 141
Entity #15: Chains: O - 30S Ribosomal protein S15 protein, length: 88 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 271 20
95% 164 276 32
90% 164 276 34
70% 164 276 47
50% 208 391 32
40% 208 391 43
30% 208 391 67
Entity #16: Chains: P - 30S Ribosomal protein S16 protein, length: 83 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 263 28
95% 160 268 45
90% 160 268 47
70% 160 268 57
50% 160 268 92
40% 160 268 117
30% 201 378 76
Entity #17: Chains: Q - 30S Ribosomal protein S17 protein, length: 99 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 121 170 54
95% 159 262 49
90% 160 266 51
70% 160 266 61
50% 160 266 95
40% 160 266 120
30% 160 266 142
Entity #18: Chains: R - 30S Ribosomal protein S18 protein, length: 70 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 28 1128
95% 8 38 1053
90% 8 38 1074
70% 8 38 1105
50% 8 38 1166
40% 8 38 1187
30% 8 38 1164
Entity #19: Chains: S - 30S Ribosomal protein S19 protein, length: 78 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 37 769
95% 8 37 1079
90% 8 37 1098
70% 8 37 1137
50% 202 381 37
40% 202 381 49
30% 202 381 72
Entity #2: Chains: B - 30S Ribosomal protein S2 protein, length: 234 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 268 23
95% 160 269 38
90% 160 269 41
70% 160 269 51
50% 160 269 91
40% 201 378 53
30% 201 378 75
Entity #20: Chains: T - 30S Ribosomal protein S20 protein, length: 99 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 144 206 42
95% 160 267 46
90% 160 267 48
70% 160 267 58
50% 160 267 93
40% 160 267 118
30% 160 267 140
Entity #21: Chains: U - 30S Ribosomal protein THX protein, length: 24 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 249 34
95% 160 249 53
90% 160 249 55
70% 160 249 68
50% 160 249 105
40% 160 249 132
30% 160 249 151
Entity #22: Chains: V - P-SITE tRNA rna, length: 77 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #23: Chains: W - E-SITE tRNA rna, length: 76 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #24: Chains: Y - A-SITE tRNA rna, length: 75 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #25: Chains: X - mRNA rna, length: 7 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - 30S Ribosomal protein S3 protein, length: 206 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 37 763
95% 8 37 1070
90% 8 37 1090
70% 8 37 1124
50% 34 83 432
40% 34 84 455
30% 34 84 473
Entity #4: Chains: D - 30S Ribosomal protein S4 protein, length: 208 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 158 261 29
95% 160 269 39
90% 160 269 42
70% 160 269 52
50% 201 378 39
40% 201 379 52
30% 201 379 74
Entity #5: Chains: E - 30S Ribosomal protein S5 protein, length: 150 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 268 24
95% 160 268 42
90% 160 268 44
70% 160 268 54
50% 202 382 36
40% 202 382 48
30% 202 384 71
Entity #6: Chains: F - 30S Ribosomal protein S6 protein, length: 101 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 162 273 18
95% 168 279 29
90% 168 279 30
70% 168 279 44
50% 168 279 86
40% 168 279 108
30% 196 328 94
Entity #7: Chains: G - 30S Ribosomal protein S7 protein, length: 155 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 161 272 19
95% 161 273 36
90% 161 273 38
70% 161 273 49
50% 189 323 56
40% 189 324 74
30% 189 324 96
Entity #8: Chains: H - 30S Ribosomal protein S8 protein, length: 138 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 268 21
95% 160 268 40
90% 161 272 39
70% 161 272 50
50% 204 384 35
40% 205 386 47
30% 242 459 43
Entity #9: Chains: I - 30S Ribosomal protein S9 protein, length: 127 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 52 113 155
95% 160 268 44
90% 160 268 46
70% 160 268 56
50% 201 378 40
40% 201 378 54
30% 237 450 50
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.