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Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon
Sequence Clustering and Redundancy Reduction Results
4K0L
Cluster # 52 Members. Sequence cutoff: 70% Cluster size: 269 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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1 4RB5 4 D 30S Ribosomal Protein S4 300852  
2 4RB7 4 D 30S Ribosomal Protein S4 300852  
3 4RB9 4 D 30S Ribosomal Protein S4 300852  
4 4RBB 4 D 30S Ribosomal Protein S4 300852  
5 4LFB 4 D ribosomal protein S4 300852  
6 4QCM 4 D 30S ribosomal protein S4 300852  
7 4QCO 4 D 30S ribosomal protein S4 300852  
8 4RBH 4 D 30S Ribosomal Protein S4 300852  
9 4RBJ 4 D 30S Ribosomal Protein S4 300852  
10 4QCQ 4 D 30S ribosomal protein S4 300852  
11 4QCS 4 D 30S ribosomal protein S4 300852  
12 4RBD 4 D 30S Ribosomal Protein S4 300852  
13 4RBF 4 D 30S Ribosomal Protein S4 300852  
14 3V2C 4 D 30S Ribosomal Protein S4 274  
15 3V2E 4 D 30S Ribosomal Protein S4 274  
16 4JI1 4 D RIBOSOMAL PROTEIN S4 300852  
17 4DR6 4 D 30S ribosomal protein S4 300852  
18 4LF7 4 D ribosomal protein S4 300852  
19 4LF8 4 D ribosomal protein S4 300852  
20 2VQE 4 D 30S RIBOSOMAL PROTEIN S4 300852  
21 2UUB 4 D 30S RIBOSOMAL PROTEIN S4 300852  
22 4DV6 4 D ribosomal protein S4 300852  
23 4JYA 4 D 30S ribosomal protein S4 300852  
24 4DR5 4 D 30S ribosomal protein S4 300852  
25 4KHP 4 D 30S Ribosomal protein S4 300852  
26 4DR2 4 D 30S ribosomal protein S4 300852  
27 4LF9 4 D ribosomal protein S4 300852  
28 4DUY 4 D ribosomal protein S4 300852  
29 4DV7 4 D ribosomal protein S4 300852  
30 4JUW 17 D 30S ribosomal protein S4 300852  
31 3UZ6 4 G 30S RIBOSOMAL PROTEIN S4 300852  
32 3UZ7 4 G 30S RIBOSOMAL PROTEIN S4 300852  
33 4DR3 4 D 30S ribosomal protein S4 300852  
34 4CR1 4 D 30S RIBOSOMAL PROTEIN S4 300852  
35 4JI3 4 D RIBOSOMAL PROTEIN S4 300852  
36 4JI6 4 D RIBOSOMAL PROTEIN S4 300852  
37 4JI8 4 D RIBOSOMAL PROTEIN S4 300852  
38 2UXC 4 D RIBOSOMAL PROTEIN S4 300852  
39 4NVU 4 D 30S Ribosomal Protein S4 274  
40 4NVW 4 D 30S Ribosomal Protein S4 274  
41 4B3M 4 D 30S RIBOSOMAL PROTEIN S4 300852  
42 4LF4 4 D ribosomal protein S4 300852  
43 4LF6 4 D ribosomal protein S4 300852  
44 4JI7 4 D RIBOSOMAL PROTEIN S4 300852  
45 4B3T 4 D 30S RIBOSOMAL PROTEIN S4 300852  
46 3UYD 4 G 30S RIBOSOMAL PROTEIN S4 300852  
47 3UYF 4 G 30S RIBOSOMAL PROTEIN S4 300852  
48 2VQF 4 D 30S RIBOSOMAL PROTEIN S4 300852  
49 2UUA 4 D 30S RIBOSOMAL PROTEIN S4 300852  
50 3TVF 4 G 30S RIBOSOMAL PROTEIN S4 300852  
51 3TVG 4 G 30S RIBOSOMAL PROTEIN S4 300852  
52 4DH9 4 D 30S Ribosomal Protein S4 274  
53 4DHB 4 D 30S Ribosomal Protein S4 274  
54 4QCY 4 D 30S ribosomal protein S4 300852  
55 4QD0 4 D 30S ribosomal protein S4 300852  
56 4B3R 4 D 30S RIBOSOMAL PROTEIN S4 300852  
57 1VX8 4 D 30S ribosomal protein S4 300852  
58 1VXI 4 D 30S ribosomal protein S4 300852  
59 4DR1 4 D 30S ribosomal protein S4 300852  
60 4LFA 4 D ribosomal protein S4 300852  
61 4DV4 4 D ribosomal protein S4 300852  
62 4JI0 4 D ribosomal protein S4 300852  
63 4NVY 4 D 30S Ribosomal Protein S4 274  
64 4NW0 4 D 30S Ribosomal Protein S4 274  
65 4JI2 4 D RIBOSOMAL PROTEIN S4 300852  
66 4JV5 4 D 30S ribosomal protein S4 300852  
67 4DR7 4 D 30S ribosomal protein S4 300852  
68 1J5E 4 D 30S RIBOSOMAL PROTEIN S4 274  
69 4GKK 4 D 30S ribosomal protein S4 300852  
70 4DUZ 4 D ribosomal protein S4 300852  
71 3V22 4 D 30S Ribosomal Protein S4 300852  
72 3V24 4 D 30S ribosomal protein S4 300852  
73 4GKJ 4 D 30S ribosomal protein S4 300852  
74 4DV3 4 D ribosomal protein S4 300852  
75 4DV5 4 D ribosomal protein S4 300852  
76 2UUC 4 D 30S RIBOSOMAL PROTEIN S4 300852  
77 4LFC 4 D ribosomal protein S4 300852  
78 1FJG 5 D 30S RIBOSOMAL PROTEIN S4 274  
79 3T1Y 4 D 30S ribosomal protein S4 300852  
80 4JI4 4 D RIBOSOMAL PROTEIN S4 300852  
81 4QCU 4 D 30S ribosomal protein S4 300852  
82 4QCW 4 D 30S ribosomal protein S4 300852  
83 1XMQ 6 D 30S Ribosomal Protein S4 274  
84 4DV0 4 D ribosomal protein S4 300852  
85 4G5T 4 G 30S RIBOSOMAL PROTEIN S4 300852  
86 4G5V 4 G 30S RIBOSOMAL PROTEIN S4 300852  
87 3I8G 4 G 30S ribosomal protein S4 300852  
88 3I8H 4 G 30S ribosomal protein S4 300852  
89 3UZL 4 G 30S RIBOSOMAL PROTEIN S4 300852  
90 3UZM 4 G 30S RIBOSOMAL PROTEIN S4 300852  
91 4B3S 4 D 30S RIBOSOMAL PROTEIN S4 300852  
92 4DV2 4 D ribosomal protein S4 300852  
93 4DV1 4 D ribosomal protein S4 300852  
94 1N32 6 D 30S RIBOSOMAL PROTEIN S4 274  
95 1I94 4 D 30S RIBOSOMAL PROTEIN S4 274  
96 3V26 4 D 30S Ribosomal Protein S4 300852  
97 3V28 4 D 30S Ribosomal Protein S4 300852  
98 4JI5 4 D RIBOSOMAL PROTEIN S4 300852  
99 4K0K 4 D 30S ribosomal protein S4 300852  
100 3UZ3 4 G 30S RIBOSOMAL PROTEIN S4 300852  
101 3UZ4 4 G 30S RIBOSOMAL PROTEIN S4 300852  
102 4QJT 5 d 30S ribosomal protein S4 300852  
103 4LF5 4 D ribosomal protein S4 300852  
104 4G5K 4 G 30S RIBOSOMAL PROTEIN S4 300852  
105 4G5M 4 G 30S RIBOSOMAL PROTEIN S4 300852  
106 2X9R 4 D 30S RIBOSOMAL PROTEIN S4 300852  
107 2X9T 4 D 30S RIBOSOMAL PROTEIN S4 300852  
108 3OHY 4 D 30S ribosomal protein S4 300852  
109 3OI0 4 D 30S ribosomal protein S4 300852  
110 3UZG 4 G 30S RIBOSOMAL PROTEIN S4 300852  
111 3UZI 4 G 30S RIBOSOMAL PROTEIN S4 300852  
112 4DR4 4 D 30S ribosomal protein S4 300852  
113 3OTO 4 D 30S RIBOSOMAL PROTEIN S4 300852  
114 2UU9 4 D 30S RIBOSOMAL PROTEIN S4 300852  
115 4ABR 5 D 30S RIBOSOMAL PROTEIN S4 300852  
116 1HR0 5 D 30S RIBOSOMAL PROTEIN S4 274  
117 4AQY 4 D 30S RIBOSOMAL PROTEIN S4 274  
118 4NXM 4 D ribosomal protein S4 300852  
119 2XQD 4 D 30S RIBOSOMAL PROTEIN S4 300852  
120 3OHC 4 D 30S ribosomal protein S4 300852  
121 3OHD 4 D 30S ribosomal protein S4 300852  
122 1IBL 7 D 30S RIBOSOMAL PROTEIN S4 274  
123 3OGE 4 D 30S ribosomal protein S4 300852  
124 3OGY 4 D 30S ribosomal protein S4 300852  
125 4NXN 4 D ribosomal protein S4 300852  
126 1XNR 6 D 16S Ribosomal protein S4 274  
127 1VXP 4 D 30S ribosomal protein S4 300852  
128 1VXS 4 D 30S ribosomal protein S4 300852  
129 2J00 4 D 30S RIBOSOMAL PROTEIN S4 300852  
130 2J02 4 D 30S RIBOSOMAL PROTEIN S4 300852  
131 3KNH 4 D 30S ribosomal protein S4 300852  
132 2Y10 4 D 30S RIBOSOMAL PROTEIN S4 300852  
133 2Y18 4 D 30S RIBOSOMAL PROTEIN S4 300852  
134 1HNZ 5 D 30S RIBOSOMAL PROTEIN S4 274  
135 1XNQ 6 D Ribosomal protein S4 274  
136 3UXS 4 D 30S ribosomal protein S4 300852  
137 3UXT 4 D 30S ribosomal protein S4 300852  
138 2XG1 4 D 30S RIBOSOMAL PROTEIN S4 300852  
139 2XFZ 4 D 30S RIBOSOMAL PROTEIN S4 300852  
140 2Y0Y 4 D 30S RIBOSOMAL PROTEIN S4 300852  
141 2Y12 4 D 30S RIBOSOMAL PROTEIN S4 300852  
142 3KIQ 3 d 30S ribosomal protein S4 300852  
143 3KIS 3 d 30S ribosomal protein S4 300852  
144 2WDG 4 D 30S RIBOSOMAL PROTEIN S4 300852  
145 2WDH 4 D 30S RIBOSOMAL PROTEIN S4 300852  
146 2WH1 4 D 30S RIBOSOMAL PROTEIN S4 300852  
147 2WH3 4 D 30S RIBOSOMAL PROTEIN S4 300852  
148 1VVL 4 D 30S ribosomal protein S4 300852  
149 1VVN 4 D 30S ribosomal protein S4 300852  
150 2Y0U 4 D 30S RIBOSOMAL PROTEIN S4 300852  
151 2Y0W 4 D 30S RIBOSOMAL PROTEIN S4 300852  
152 2WDK 4 D 30S RIBOSOMAL PROTEIN S4 300852  
153 2WDM 4 D 30S RIBOSOMAL PROTEIN S4 300852  
154 3OI2 4 D 30S ribosomal protein S4 300852  
155 3OI4 4 D 30S ribosomal protein S4 300852  
156 4BYB 4 D 30S RIBOSOMAL PROTEIN S4 300852  
157 4BYD 4 D 30S RIBOSOMAL PROTEIN S4 300852  
158 2Y14 4 D 30S RIBOSOMAL PROTEIN S4 300852  
159 2Y16 4 D 30S RIBOSOMAL PROTEIN S4 300852  
160 4K0L 4 D 30S Ribosomal protein S4 300852  
161 4K0P 4 D 30S Ribosomal protein S4 300852  
162 1XMO 6 D 30S ribosomal protein S4 274  
163 3T1H 4 D 30S ribosomal protein S4 300852  
164 2UXD 4 D RIBOSOMAL PROTEIN S4 300852  
165 1N33 6 D 30S RIBOSOMAL PROTEIN S4 274  
166 1IBK 5 D 30S RIBOSOMAL PROTEIN S4 274  
167 3I9B 4 G 30S RIBOSOMAL PROTEIN S4 300852  
168 3I9D 4 G 30S ribosomal protein S4 300852  
169 3ZN7 4 D 30S RIBOSOMAL PROTEIN S4 300852  
170 3ZND 4 D 30S RIBOSOMAL PROTEIN S4 300852  
171 4EJ9 4 D 30S ribosomal protein S4 300852  
172 4EJA 4 D 30S ribosomal protein S4 300852  
173 1HNW 5 D 30S RIBOSOMAL PROTEIN S4 274  
174 3KNL 4 D 30S ribosomal protein S4 300852  
175 3KNN 4 D 30S ribosomal protein S4 300852  
176 1IBM 7 D 30S RIBOSOMAL PROTEIN S4 274  
177 3HUW 4 D 30S ribosomal protein S4 300852  
178 3HUY 4 D 30S ribosomal protein S4 300852  
179 3KNJ 4 D 30S ribosomal protein S4 300852  
180 3PYS 4 D 30S ribosomal protein S4 262724  
181 3PYU 4 D 30S ribosomal protein S4 262724  
182 3KIU 3 d 30S ribosomal protein S4 300852  
183 3KIX 3 d 30S ribosomal protein S4 300852  
184 1HNX 5 D 30S RIBOSOMAL PROTEIN S4 274  
185 4L6K 4 D 30S ribosomal protein S4 262724  
186 4L6M 4 D 30S ribosomal protein S4 262724  
187 4KFH 7 D 30S ribosomal protein S4 262724  
188 4KFK 7 D 30S ribosomal protein S4 262724  
189 1VY0 4 D 30S ribosomal protein S4 300852  
190 1VY2 4 D 30S ribosomal protein S4 300852  
191 4B8F 4 D 30S RIBOSOMAL PROTEIN S4 300852  
192 4B8H 4 D 30S RIBOSOMAL PROTEIN S4 300852  
193 1VXK 4 D 30S ribosomal protein S4 300852  
194 1VXM 4 D 30S ribosomal protein S4 300852  
195 4W2A 4 D 30S ribosomal protein S4 300852  
196 4W2C 4 D 30S ribosomal protein S4 300852  
197 3F1E 6 D 30S ribosomal protein S4 274  
198 3F1G 6 D 30S ribosomal protein S4 274  
199 3PYN 4 D 30S ribosomal protein S4 262724  
200 3PYQ 4 D 30S ribosomal protein S4 262724  
201 2WRI 4 D 30S RIBOSOMAL PROTEIN S4 300852  
202 2WRK 4 D 30S RIBOSOMAL PROTEIN S4 300852  
203 4KWZ 4 D 30S ribosomal protein S4 300852  
204 4KX1 4 D 30S ribosomal protein S4 300852  
205 1VVX 4 D 30S ribosomal protein S4 300852  
206 1VVZ 4 D 30S ribosomal protein S4 300852  
207 2E5L 5 D 30S ribosomal protein S4 274  
208 2HHH 4 D 30S ribosomal protein S4 300852  
209 4OX9 4 D 30S ribosomal protein S4 300852  
210 2UXB 4 D RIBOSOMAL PROTEIN S4 300852  
211 1I96 4 D 30S RIBOSOMAL PROTEIN S4 274  
212 4KCY 3 D 30S ribosomal protein S4 262724  
213 1N34 5 D 30S RIBOSOMAL PROTEIN S4 274  
214 4KD0 3 D 30S ribosomal protein S4 262724  
215 2V46 4 D 30S RIBOSOMAL PROTEIN S4 300852  
216 2V48 4 D 30S RIBOSOMAL PROTEIN S4 300852  
217 3D5A 6 D 30S ribosomal protein S4 262724  
218 3D5C 6 D 30S ribosomal protein S4 262724  
219 1VVP 4 D 30S ribosomal protein S4 300852  
220 1VVR 4 D 30S ribosomal protein S4 300852  
221 4KVB 4 D 30S ribosomal protein S4 262724  
222 3MR8 4 D 30S ribosomal protein S4 262724  
223 3MS0 4 D 30S ribosomal protein S4 262724  
224 3V6U 4 D 30S ribosomal protein S4 300852  
225 3V6V 4 D 30S ribosomal protein S4 300852  
226 1N36 4 D 30S RIBOSOMAL PROTEIN S4 274  
227 2ZM6 4 D 30S ribosomal protein S4 274  
228 1VVT 4 D 30S ribosomal protein S4 300852  
229 1VVV 4 D 30S ribosomal protein S4 300852  
230 2F4V 5 D 30S ribosomal protein S4 274  
231 4KD8 3 D 30S ribosomal protein S4 262724  
232 4KDA 3 D 30S ribosomal protein S4 262724  
233 1FKA 4 D 30S RIBOSOMAL PROTEIN S4 274  
234 2WRN 4 D 30S RIBOSOMAL PROTEIN S4 300852  
235 2WRQ 4 D 30S RIBOSOMAL PROTEIN S4 300852  
236 1I97 4 D 30S RIBOSOMAL PROTEIN S4 274  
237 4KBT 3 D 30S ribosomal protein S4 262724  
238 4KBV 3 D 30S ribosomal protein S4 262724  
239 1I95 4 D 30S RIBOSOMAL PROTEIN S4 274  
240 3ZVO 4 D 30S RIBOSOMAL PROTEIN S4 300852  
241 4KDG 3 D 30S ribosomal protein S4 262724  
242 4KDJ 3 D 30S ribosomal protein S4 262724  
243 4QS0 3 D 30S ribosomal protein S4 262724  
244 4QS2 3 D 30S ribosomal protein S4 262724  
245 2HGP 6 G 30S ribosomal protein S4 300852  
246 2QNH 7 e 30S ribosomal protein S4 262724  
247 2HGI 6 G 30S ribosomal protein S4 300852  
248 2HGR 7 G 30S ribosomal protein S4 300852  
249 2OW8 7 e 30S ribosomal protein S4 262724  
250 1YL4 6 G 30S ribosomal protein S4 300852  
251 2B64 7 D 30S ribosomal protein S4 300852  
252 2B9M 7 D 30S ribosomal protein S4 300852  
253 2B9O 7 D 30S ribosomal protein S4 300852  
254 1PNS 6 D 30S ribosomal protein S4 562  
255 1PNX 4 D 30S ribosomal protein S4 562  
256 1VOQ 4 D 30S ribosomal protein S4 562  
257 1VOS 4 D 30S ribosomal protein S4 562  
258 1VOV 4 D 30S ribosomal protein S4 562  
259 1VOX 4 D 30S ribosomal protein S4 562  
260 1VOZ 4 D 30S ribosomal protein S4 562  
261 2XUY 4 D 30S RIBOSOMAL PROTEIN S4 300852  
262 2XSY 4 D 30S RIBOSOMAL PROTEIN S4 300852  
263 3FIC 3 D 30S ribosomal protein S4 274  
264 2ZKQ 12 d 40S Ribosomal protein S9e 9615  
265 1ML5 9 G 30S RIBOSOMAL PROTEIN S4 562  
266 1JGO 7 G 30S RIBOSOMAL PROTEIN S4 274  
267 1JGP 7 G 30S RIBOSOMAL PROTEIN S4 274  
268 1JGQ 7 G 30S RIBOSOMAL PROTEIN S4 274  
269 1GIX 7 G 30S RIBOSOMAL PROTEIN S4 274  
 
Sequence Clusters for the Sequence Entities in PDB 4K0L
Entity #1: Chains: A - 16S ribosomal RNA rna, length: 1504 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #10: Chains: J - 30S Ribosomal protein S10 protein, length: 98 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 158 265 27
95% 160 267 47
90% 160 267 49
70% 160 267 59
50% 205 382 34
40% 205 382 45
30% 205 387 65
Entity #11: Chains: K - 30S Ribosomal protein S11 protein, length: 119 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 268 25
95% 160 268 43
90% 160 268 45
70% 160 268 55
50% 199 376 41
40% 223 436 38
30% 223 436 51
Entity #12: Chains: L - 30S Ribosomal protein S12 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 123 237 35
95% 160 275 35
90% 160 275 37
70% 199 388 24
50% 199 388 33
40% 199 388 44
30% 199 388 68
Entity #13: Chains: M - 30S Ribosomal protein S13 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 269 22
95% 160 269 41
90% 160 269 43
70% 160 269 53
50% 199 378 38
40% 199 378 51
30% 221 434 54
Entity #14: Chains: N - 30S Ribosomal protein S14 protein, length: 60 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 267 26
95% 160 267 48
90% 160 267 50
70% 160 267 60
50% 160 267 93
40% 160 267 119
30% 160 267 140
Entity #15: Chains: O - 30S Ribosomal protein S15 protein, length: 88 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 271 20
95% 164 276 32
90% 164 276 34
70% 164 276 47
50% 206 389 32
40% 206 389 43
30% 206 389 67
Entity #16: Chains: P - 30S Ribosomal protein S16 protein, length: 83 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 263 28
95% 160 268 45
90% 160 268 47
70% 160 268 57
50% 160 268 91
40% 160 268 117
30% 199 376 76
Entity #17: Chains: Q - 30S Ribosomal protein S17 protein, length: 99 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 121 170 53
95% 159 262 49
90% 160 266 51
70% 160 266 61
50% 160 266 94
40% 160 266 120
30% 160 266 142
Entity #18: Chains: R - 30S Ribosomal protein S18 protein, length: 70 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 28 1114
95% 8 38 1012
90% 8 38 1035
70% 8 38 1078
50% 8 38 1154
40% 8 38 1174
30% 8 38 1150
Entity #19: Chains: S - 30S Ribosomal protein S19 protein, length: 78 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 37 734
95% 8 37 1040
90% 8 37 1061
70% 8 37 1109
50% 200 379 37
40% 200 379 49
30% 200 379 72
Entity #2: Chains: B - 30S Ribosomal protein S2 protein, length: 234 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 268 23
95% 160 269 38
90% 160 269 41
70% 160 269 51
50% 160 269 90
40% 199 376 53
30% 199 376 75
Entity #20: Chains: T - 30S Ribosomal protein S20 protein, length: 99 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 144 206 42
95% 160 267 46
90% 160 267 48
70% 160 267 58
50% 160 267 92
40% 160 267 118
30% 160 267 139
Entity #21: Chains: U - 30S Ribosomal protein THX protein, length: 24 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 249 33
95% 160 249 52
90% 160 249 55
70% 160 249 66
50% 160 249 103
40% 160 249 130
30% 160 249 150
Entity #22: Chains: V - P-SITE tRNA rna, length: 77 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #23: Chains: W - E-SITE tRNA rna, length: 76 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #24: Chains: Y - A-SITE tRNA rna, length: 75 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #25: Chains: X - mRNA rna, length: 7 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - 30S Ribosomal protein S3 protein, length: 206 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 37 728
95% 8 37 1031
90% 8 37 1052
70% 8 37 1095
50% 32 81 438
40% 32 82 457
30% 32 82 475
Entity #4: Chains: D - 30S Ribosomal protein S4 protein, length: 208 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 158 261 29
95% 160 269 39
90% 160 269 42
70% 160 269 52
50% 199 376 39
40% 199 377 52
30% 199 377 74
Entity #5: Chains: E - 30S Ribosomal protein S5 protein, length: 150 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 268 24
95% 160 268 42
90% 160 268 44
70% 160 268 54
50% 200 380 36
40% 200 380 48
30% 200 382 71
Entity #6: Chains: F - 30S Ribosomal protein S6 protein, length: 101 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 162 273 18
95% 168 279 29
90% 168 279 30
70% 168 279 44
50% 168 279 82
40% 168 279 106
30% 194 326 94
Entity #7: Chains: G - 30S Ribosomal protein S7 protein, length: 155 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 161 272 19
95% 161 273 36
90% 161 273 38
70% 161 273 49
50% 187 321 56
40% 187 322 73
30% 187 322 96
Entity #8: Chains: H - 30S Ribosomal protein S8 protein, length: 138 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 160 268 21
95% 160 268 40
90% 161 272 39
70% 161 272 50
50% 202 382 35
40% 203 384 46
30% 226 441 47
Entity #9: Chains: I - 30S Ribosomal protein S9 protein, length: 127 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 52 113 138
95% 160 268 44
90% 160 268 46
70% 160 268 56
50% 199 376 40
40% 199 376 54
30% 221 432 56
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.