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Crystal structure of E. coli glutaminyl-tRNA synthetase bound to ATP and native tRNA(Gln) containing the cmnm5s2U34 anticodon wobble base
Sequence Clustering and Redundancy Reduction Results
4JYZ
Cluster # 2163 Members. Sequence cutoff: 50% Cluster size: 21 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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1 5BNZ 1 A, B Glutamine--tRNA ligase PsaeA.18222.a.B1 208964   6.1.1.18   
2 4JXX 1 A Glutamine--tRNA ligase 83333   6.1.1.18   
3 1QTQ 2 A PROTEIN (GLUTAMINYL-TRNA SYNTHETASE) 562   6.1.1.18   
4 1GTR 2 A GLUTAMINYL-tRNA SYNTHETASE 562   6.1.1.18   
5 4JXZ 1 A Glutamine--tRNA ligase 83333   6.1.1.18   
6 1ZJW 2 A Glutaminyl-tRNA synthetase 562   6.1.1.18   
7 1QRS 2 A PROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)) 562   6.1.1.18   
8 2RD2 2 A Glutaminyl-tRNA synthetase 83333   6.1.1.18   
9 4JYZ 1 A Glutamine--tRNA ligase 83333   6.1.1.18   
10 2RE8 2 A Glutaminyl-tRNA synthetase 562   6.1.1.18   
11 1GTS 2 A PROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)) 562   6.1.1.18   
12 1O0C 2 A Glutaminyl-tRNA synthetase complexed with AMPCPP, see REMARK 600 562   6.1.1.18   
13 1EXD 2 A GLUTAMINYL-TRNA SYNTHETASE 562   6.1.1.18   
14 1QRT 2 A PROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)) 562   6.1.1.18   
15 1O0B 2 A Glutaminyl-tRNA synthetase complexed with AMPCPP, see REMARK 600 562   6.1.1.18   
16 1EUY 2 A GLUTAMINYL-TRNA SYNTHETASE 562   6.1.1.18   
17 1NYL 1 A Glutaminyl-tRNA synthetase 562   6.1.1.18   
18 4P2B 1 A Glutamine aminoacyl-tRNA synthetase Database gene sequence was optimized for codon usage before synthesis. UNP residues 332-886 5811  
19 1QRU 2 A PROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)) 562   6.1.1.18   
20 1EUQ 2 A GLUTAMINYL-TRNA SYNTHETASE 562   6.1.1.18   
21 1GSG 2 P GLUTAMINYL-TRNA SYNTHETASE 562   6.1.1.18   
 
Sequence Clusters for the Sequence Entities in PDB 4JYZ
Entity #1: Chains: A - Glutamine--tRNA ligase protein, length: 553 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 14 2881
95% 8 19 2534
90% 8 19 2559
70% 8 19 2579
50% 9 21 2163
40% 9 21 2170
30% 9 21 2041
Entity #2: Chains: B - RNA (72-MER) rna, length: 75 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

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