Sequence Similarity Clusters for the Entities in PDB 4JYZ

Entity #1 | Chains: A
Glutamine--tRNA ligase protein, length: 553 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 3964
95 % 8 19 3379 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 8 19 3429
70 % 8 19 3380
50 % 9 21 2826
40 % 9 21 2773
30 % 9 21 2604
Entity #2 | Chains: B
RNA (72-MER) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4JXX 1 A Glutamine--tRNA ligase 562 6.1.1.18 | Details
2 1QTQ 2 A PROTEIN (GLUTAMINYL-TRNA SYNTHETASE) 562 6.1.1.18 | Details
3 1GTR 2 A GLUTAMINYL-tRNA SYNTHETASE 562
4 4JXZ 1 A Glutamine--tRNA ligase 562 6.1.1.18 | Details
5 1ZJW 2 A Glutaminyl-tRNA synthetase 562 6.1.1.18 | Details
6 4JYZ 1 A Glutamine--tRNA ligase 562 6.1.1.18 | Details
7 1GTS 2 A PROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)) 562
8 1O0C 2 A Glutaminyl-tRNA synthetase complexed with AMPCPP, see REMARK 600 562 6.1.1.18 | Details
9 1EXD 2 A GLUTAMINYL-TRNA SYNTHETASE 562 6.1.1.18 | Details
10 1O0B 2 A Glutaminyl-tRNA synthetase complexed with AMPCPP, see REMARK 600 562 6.1.1.18 | Details
11 1EUY 2 A GLUTAMINYL-TRNA SYNTHETASE 562 6.1.1.18 | Details
12 1NYL 1 A Glutaminyl-tRNA synthetase 562 6.1.1.18 | Details
13 1EUQ 2 A GLUTAMINYL-TRNA SYNTHETASE 562 6.1.1.18 | Details
14 1GSG 2 P GLUTAMINYL-TRNA SYNTHETASE 562 6.1.1.18 | Details