Sequence Similarity Clusters for the Entities in PDB 4JYZ

Entity #1 | Chains: A
Glutamine--tRNA ligase protein, length: 553 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 16 4033
95 % 8 19 3568 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 8 19 3632
70 % 8 19 3580
50 % 9 21 2996
40 % 9 21 2922
30 % 9 21 2696
Entity #2 | Chains: B
RNA (72-MER) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures