Sequence Similarity Clusters for the Entities in PDB 4JXX

Entity #1 | Chains: A
Glutamine--tRNA ligase protein, length: 553 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 14 3747
95 % 1 19 3208 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 1 19 3251
70 % 1 19 3222
50 % 2 21 2702
40 % 2 21 2659
30 % 2 21 2498
Entity #2 | Chains: B
RNA (71-MER) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.