Sequence Similarity Clusters for the Entities in PDB 4JVP

Entity #1 | Chains: A,B
Anti-HCV E2 alpaca nanobody D03 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42944
95 % 1 1 32343 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 30961
70 % 69 341 10
50 % 86 525 8
40 % 135 866 5
30 % 149 992 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.