Sequence Similarity Clusters for the Entities in PDB 4JVP

Entity #1 | Chains: A,B
Anti-HCV E2 alpaca nanobody D03 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44530
95 % 1 1 33522 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 32054
70 % 76 379 9
50 % 96 576 7
40 % 145 929 5
30 % 160 1056 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.