Sequence Similarity Clusters for the Entities in PDB 4JVF

Entity #1 | Chains: B
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 22 1591
95 % 19 24 1798 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.2
PDBFlex
90 % 19 24 1837
70 % 19 24 1866
50 % 19 24 1890
40 % 19 24 1893
30 % 19 24 1827

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.