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Ternary complex of gamma-OHPDG adduct modified dna (zero primer) with dna polymerase iv and incoming dgtp
Sequence Clustering and Redundancy Reduction Results
4JUZ
Sequence Clusters for the Sequence Entities in PDB 4JUZ
Entity #1: Chains: A - DNA polymerase IV protein, length: 347 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 64 110 105
95% 70 119 141
90% 70 119 150
70% 77 131 156
50% 77 131 191
40% 77 131 211
30% 77 131 226
Entity #2: Chains: B - DNA (5'-D(P*CP*(KAG)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*C)-3') dna, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.