Sequence Similarity Clusters for the Entities in PDB 4JUO

Entity #1 | Chains: A
DNA topoisomerase 4 subunit A protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 14 1424
95 % 14 14 1914
90 % 14 14 1960
70 % 14 14 1981
50 % 45 45 500
40 % 45 45 540
30 % 45 45 541
Entity #2 | Chains: C
DNA topoisomerase 4 subunit B protein, length: 670 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49770
95 % 1 1 37026
90 % 1 1 35380
70 % 1 1 31544
50 % 1 1 27056
40 % 1 1 23958
30 % 1 1 20429
Entity #3 | Chains: E
E-site DNA dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: F
E-site DNA dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: G
E-site DNA dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #6 | Chains: H
E-site DNA dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.