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An Information Portal to 107049 Biological Macromolecular Structures

A low-resolution three-gate structure of topoisomerase IV from Streptococcus pneumoniae in space group H32
Sequence Clustering and Redundancy Reduction Results
4JUO
Sequence Clusters for the Sequence Entities in PDB 4JUO
Entity #1: Chains: A - DNA topoisomerase 4 subunit A protein, length: 496 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 14 14 1057
95% 14 14 1455
90% 14 14 1490
70% 14 14 1512
50% 25 25 763
40% 25 25 787
30% 25 25 782
Entity #2: Chains: C - DNA topoisomerase 4 subunit B protein, length: 670 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 39322
95% 1 1 29436
90% 1 1 28290
70% 1 1 25517
50% 1 1 22085
40% 1 1 19665
30% 1 1 16834
Entity #3: Chains: E - E-site DNA dna, length: 11 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: F - E-site DNA dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #5: Chains: G - E-site DNA dna, length: 11 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #6: Chains: H - E-site DNA dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.