Sequence Similarity Clusters for the Entities in PDB 4JN2

Entity #1 | Chains: A,L
anti dabigatran Fab protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29507
95 % 1 2 22441 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 43 762 2
70 % 139 2519 1
50 % 290 5107 1
40 % 374 5756 1
30 % 452 7175 1
Entity #2 | Chains: B,H
anti dabigatran Fab protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25423
95 % 1 2 22443 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.3
PDBFlex
90 % 1 2 21740
70 % 141 2478 2
50 % 291 5107 1
40 % 375 5756 1
30 % 453 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures