Sequence Similarity Clusters for the Entities in PDB 4JN2

Entity #1 | Chains: A,L
anti dabigatran Fab protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28284
95 % 1 2 23551 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 42 763 2
70 % 136 2426 1
50 % 283 4913 1
40 % 283 4913 1
30 % 302 5780 1
Entity #2 | Chains: B,H
anti dabigatran Fab protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28131
95 % 1 2 23447 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.3
PDBFlex
90 % 1 2 22718
70 % 138 2376 2
50 % 284 4913 1
40 % 284 4913 1
30 % 303 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures