Sequence Similarity Clusters for the Entities in PDB 4JN2

Entity #1 | Chains: A,L
anti dabigatran Fab protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26776
95 % 1 2 22325 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 35 683 3
70 % 104 1841 2
50 % 253 4537 1
40 % 253 4537 1
30 % 271 5342 1
Entity #2 | Chains: B,H
anti dabigatran Fab protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26627
95 % 1 2 22227 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.3
PDBFlex
90 % 1 2 21572
70 % 124 2197 1
50 % 254 4537 1
40 % 254 4537 1
30 % 272 5342 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.