Sequence Similarity Clusters for the Entities in PDB 4JN2

Entity #1 | Chains: A,L
anti dabigatran Fab protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27642
95 % 1 2 23046 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 38 720 3
70 % 127 2327 1
50 % 264 4713 1
40 % 264 4713 1
30 % 282 5567 1
Entity #2 | Chains: B,H
anti dabigatran Fab protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27490
95 % 1 2 22945 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.3
PDBFlex
90 % 1 2 22252
70 % 129 2280 2
50 % 265 4713 1
40 % 265 4713 1
30 % 283 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.