Sequence Similarity Clusters for the Entities in PDB 4JL3

Entity #1 | Chains: A,B,C,D
Transcriptional regulator, TetR family protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 18648
95 % 2 2 12494
90 % 2 2 12260
70 % 2 2 11533
50 % 2 2 10342
40 % 2 2 9430
30 % 2 2 8234
Entity #2 | Chains: E
DNA (31-MER) dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F
DNA (31-MER) dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.