Sequence Similarity Clusters for the Entities in PDB 4JL3

Entity #1 | Chains: A,B,C,D
Transcriptional regulator, TetR family protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22624
95 % 2 2 15043 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.8
PDBFlex
90 % 2 2 14759
70 % 2 2 13828
50 % 2 2 12275
40 % 2 2 11110
30 % 2 2 9657
Entity #2 | Chains: E
DNA (31-MER) dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F
DNA (31-MER) dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures