Sequence Similarity Clusters for the Entities in PDB 4JL3

Entity #1 | Chains: A,B,C,D
Transcriptional regulator, TetR family protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21709
95 % 2 2 14499 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.8
PDBFlex
90 % 2 2 14225
70 % 2 2 13342
50 % 2 2 11865
40 % 2 2 10747
30 % 2 2 9341
Entity #2 | Chains: E
DNA (31-MER) dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F
DNA (31-MER) dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.