Sequence Similarity Clusters for the Entities in PDB 4JKV

Entity #1 | Chains: A,B
Soluble cytochrome b562, Smoothened homolog protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28792
95 % 1 2 23793 Flexibility: Medium
Max RMSD: 3.1, Avg RMSD: 3.1
PDBFlex
90 % 1 2 23031
70 % 1 2 20953
50 % 1 2 18022
40 % 1 2 15940
30 % 1 2 14379

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures