Sequence Similarity Clusters for the Entities in PDB 4JKV

Entity #1 | Chains: A,B
Soluble cytochrome b562, Smoothened homolog protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26040
95 % 1 2 22054 Flexibility: Medium
Max RMSD: 3.1, Avg RMSD: 3.1
PDBFlex
90 % 1 2 21415
70 % 1 2 19661
50 % 1 2 17072
40 % 1 2 15236
30 % 1 2 13074

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures