Sequence Similarity Clusters for the Entities in PDB 4JKD

Entity #1 | Chains: A,B
Pre-mRNA-processing-splicing factor 8 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 2637
95 % 7 13 2650 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.4
PDBFlex
90 % 7 13 2721
70 % 7 13 2696
50 % 7 13 2668
40 % 7 13 2605
30 % 7 13 2434

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures