Sequence Similarity Clusters for the Entities in PDB 4JKD

Entity #1 | Chains: A,B
Pre-mRNA-processing-splicing factor 8 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38663
95 % 7 13 2419 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.4
PDBFlex
90 % 7 13 2479
70 % 7 13 2466
50 % 7 13 2432
40 % 7 13 2407
30 % 7 13 2283

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.