Sequence Similarity Clusters for the Entities in PDB 4JKA

Entity #1 | Chains: A,B
Pre-mRNA-processing-splicing factor 8 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15288
95 % 3 13 2521 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.3
PDBFlex
90 % 3 13 2577
70 % 3 13 2565
50 % 3 13 2538
40 % 3 13 2498
30 % 3 13 2372

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.