Sequence Similarity Clusters for the Entities in PDB 4JKA

Entity #1 | Chains: A,B
Pre-mRNA-processing-splicing factor 8 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 14810
95 % 3 13 2437 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.4
PDBFlex
90 % 3 13 2495
70 % 3 13 2484
50 % 3 13 2456
40 % 3 13 2419
30 % 3 13 2299

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.