Sequence Similarity Clusters for the Entities in PDB 4JI5

Entity #1 | Chains: A
16S rRNA rna, length: 1522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
RIBOSOMAL PROTEIN S10 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 245 34
95 % 115 246 47
90 % 115 246 52
70 % 115 246 63
50 % 139 340 29
40 % 139 340 39
30 % 153 406 41
Entity #11 | Chains: K
RIBOSOMAL PROTEIN S11 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 247 32
95 % 115 247 43
90 % 115 247 48
70 % 115 247 57
50 % 133 334 37
40 % 149 407 27
30 % 149 408 40
Entity #12 | Chains: L
RIBOSOMAL PROTEIN S12 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 46 468
95 % 115 254 35
90 % 115 254 40
70 % 133 345 23
50 % 133 346 28
40 % 133 346 38
30 % 133 346 57
Entity #13 | Chains: M
RIBOSOMAL PROTEIN S13 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 248 30
95 % 115 248 41
90 % 115 248 46
70 % 115 248 55
50 % 136 339 34
40 % 136 339 46
30 % 150 407 44
Entity #14 | Chains: N
RIBOSOMAL PROTEIN S14 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 246 33
95 % 115 246 48
90 % 115 246 53
70 % 115 247 60
50 % 115 247 85
40 % 115 247 107
30 % 115 247 119
Entity #15 | Chains: O
RIBOSOMAL PROTEIN S15 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 250 27
95 % 119 255 33
90 % 119 255 38
70 % 119 255 48
50 % 140 347 27
40 % 140 348 37
30 % 140 348 56
Entity #16 | Chains: P
RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 242 35
95 % 115 247 45
90 % 115 247 50
70 % 115 247 59
50 % 115 247 84
40 % 115 248 105
30 % 136 337 63
Entity #17 | Chains: Q
RIBOSOMAL PROTEIN S17 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 84 157 55
95 % 114 241 49
90 % 115 245 54
70 % 115 245 64
50 % 115 245 87
40 % 115 245 109
30 % 115 245 121
Entity #18 | Chains: R
RIBOSOMAL PROTEIN S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 90 163 56
95 % 103 212 63
90 % 103 212 66
70 % 103 212 77
50 % 103 212 108
40 % 103 212 129
30 % 103 212 142
Entity #19 | Chains: S
RIBOSOMAL PROTEIN S19 protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 116 250 26
95 % 116 250 37
90 % 116 250 43
70 % 116 250 52
50 % 134 337 33
40 % 134 337 44
30 % 134 337 59
Entity #2 | Chains: B
RIBOSOMAL PROTEIN S2 protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 247 28
95 % 115 248 38
90 % 115 248 44
70 % 115 248 53
50 % 133 333 36
40 % 133 334 47
30 % 133 334 61
Entity #20 | Chains: T
RIBOSOMAL PROTEIN S20 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 103 196 46
95 % 115 246 46
90 % 115 246 51
70 % 115 246 62
50 % 115 246 86
40 % 115 246 108
30 % 115 246 120
Entity #21 | Chains: U
RIBOSOMAL PROTEIN THX protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 237 39
95 % 115 237 55
90 % 115 237 59
70 % 115 237 69
50 % 115 237 93
40 % 115 237 115
30 % 115 237 130
Entity #3 | Chains: C
RIBOSOMAL PROTEIN S3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 102 211 43
95 % 102 211 64
90 % 102 211 67
70 % 102 211 78
50 % 106 261 80
40 % 106 261 98
30 % 106 261 116
Entity #4 | Chains: D
RIBOSOMAL PROTEIN S4 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 114 240 36
95 % 115 248 39
90 % 115 248 45
70 % 115 248 54
50 % 133 334 35
40 % 133 335 45
30 % 133 335 60
Entity #5 | Chains: E
RIBOSOMAL PROTEIN S5 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 247 31
95 % 115 247 42
90 % 115 247 47
70 % 115 247 56
50 % 134 338 32
40 % 134 338 43
30 % 134 340 58
Entity #6 | Chains: F
RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 117 252 24
95 % 123 258 32
90 % 123 258 36
70 % 123 258 47
50 % 123 258 82
40 % 123 258 101
30 % 139 297 79
Entity #7 | Chains: G
RIBOSOMAL PROTEIN S7 protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 116 251 25
95 % 116 252 36
90 % 116 252 41
70 % 116 252 50
50 % 134 297 49
40 % 134 298 62
30 % 134 298 86
Entity #8 | Chains: H
RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 247 29
95 % 115 247 40
90 % 116 251 42
70 % 116 251 51
50 % 136 340 31
40 % 137 342 40
30 % 152 411 39
Entity #9 | Chains: I
RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 96 157 70
95 % 115 247 44
90 % 115 247 49
70 % 115 247 58
50 % 133 334 38
40 % 133 334 48
30 % 147 402 45

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.