Sequence Similarity Clusters for the Entities in PDB 4JI0

Entity #1 | Chains: A
16S rRNA rna, length: 1522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
ribosomal protein S10 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 85 252 35
95 % 85 253 48
90 % 85 253 53
70 % 85 253 63
50 % 103 348 28
40 % 103 348 38
30 % 116 420 36
Entity #11 | Chains: K
ribosomal protein S11 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 85 254 33
95 % 85 254 44
90 % 85 254 49
70 % 85 254 58
50 % 97 342 36
40 % 112 421 22
30 % 112 422 35
Entity #12 | Chains: L
ribosomal protein S12 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 20163
95 % 85 261 35
90 % 85 261 39
70 % 97 353 23
50 % 97 354 27
40 % 97 354 37
30 % 97 354 56
Entity #13 | Chains: M
ribosomal protein S13 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 85 255 30
95 % 85 255 41
90 % 85 255 46
70 % 85 255 55
50 % 98 347 33
40 % 98 347 45
30 % 111 421 41
Entity #14 | Chains: N
ribosomal protein S14 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 85 253 34
95 % 85 253 49
90 % 85 253 54
70 % 85 254 61
50 % 85 254 86
40 % 85 254 106
30 % 85 254 119
Entity #15 | Chains: O
ribosomal protein S15 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 85 257 27
95 % 89 262 34
90 % 89 262 38
70 % 89 262 49
50 % 104 355 26
40 % 104 356 36
30 % 104 356 55
Entity #16 | Chains: P
ribosomal protein S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 85 249 36
95 % 85 254 46
90 % 85 254 51
70 % 85 254 60
50 % 85 254 85
40 % 85 255 105
30 % 98 345 63
Entity #17 | Chains: Q
ribosomal protein S17 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 70 161 57
95 % 85 248 50
90 % 85 252 55
70 % 85 252 64
50 % 85 252 88
40 % 85 252 108
30 % 85 252 121
Entity #18 | Chains: R
ribosomal protein S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 74 168 56
95 % 80 219 63
90 % 80 219 68
70 % 80 219 78
50 % 80 219 108
40 % 80 219 129
30 % 80 219 142
Entity #19 | Chains: S
ribosomal protein S19 protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 86 257 26
95 % 86 257 37
90 % 86 257 43
70 % 86 257 52
50 % 98 345 31
40 % 98 345 42
30 % 98 345 60
Entity #2 | Chains: B
ribosomal protein S2 protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 85 254 28
95 % 85 255 38
90 % 85 255 44
70 % 85 255 53
50 % 97 341 35
40 % 97 342 47
30 % 97 342 62
Entity #20 | Chains: T
ribosomal protein S20 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 79 202 47
95 % 85 253 47
90 % 85 253 52
70 % 85 253 62
50 % 85 253 87
40 % 85 253 107
30 % 85 253 120
Entity #21 | Chains: U
ribosomal protein THX protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 85 244 38
95 % 85 244 54
90 % 85 244 57
70 % 85 244 68
50 % 85 244 92
40 % 85 244 114
30 % 85 244 128
Entity #3 | Chains: C
ribosomal protein S3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 79 218 44
95 % 79 218 64
90 % 79 218 69
70 % 79 218 79
50 % 82 269 79
40 % 82 269 97
30 % 82 269 112
Entity #4 | Chains: D
ribosomal protein S4 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 85 247 37
95 % 85 255 39
90 % 85 255 45
70 % 85 255 54
50 % 97 342 34
40 % 97 343 44
30 % 97 343 61
Entity #5 | Chains: E
ribosomal protein S5 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 85 254 32
95 % 85 254 43
90 % 85 254 48
70 % 85 254 57
50 % 98 346 30
40 % 98 346 41
30 % 98 348 57
Entity #6 | Chains: F
ribosomal protein S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 87 259 24
95 % 93 265 33
90 % 93 265 36
70 % 93 265 44
50 % 93 265 82
40 % 93 265 100
30 % 104 304 78
Entity #7 | Chains: G
ribosomal protein S7 protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 86 258 25
95 % 86 259 36
90 % 86 259 41
70 % 86 259 50
50 % 97 304 51
40 % 97 305 63
30 % 97 305 87
Entity #8 | Chains: H
ribosomal protein S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 86 254 29
95 % 86 254 40
90 % 86 258 42
70 % 86 258 51
50 % 100 348 29
40 % 101 350 39
30 % 115 425 33
Entity #9 | Chains: I
ribosomal protein S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 76 163 72
95 % 85 254 45
90 % 85 254 50
70 % 85 254 59
50 % 97 342 37
40 % 97 342 48
30 % 110 416 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.