Sequence Similarity Clusters for the Entities in PDB 4JDY

Entity #1 | Chains: A,B,C
Pyridoxal biosynthesis lyase PdxS protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26985
95 % 1 1 22596 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 21940
70 % 1 1 20118
50 % 5 29 404
40 % 5 29 432
30 % 5 29 436

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.