Sequence Similarity Clusters for the Entities in PDB 4JDY

Entity #1 | Chains: A,B,C
Pyridoxal biosynthesis lyase PdxS protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27549
95 % 1 1 23028 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 22339
70 % 1 1 20487
50 % 5 29 420
40 % 5 29 448
30 % 5 29 447

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures