Sequence Similarity Clusters for the Entities in PDB 4JBM

Entity #1 | Chains: A,B
Interferon-inducible protein AIM2 protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43888
95 % 1 1 36807 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.3
PDBFlex
90 % 1 1 36118
70 % 1 1 32021
50 % 1 3 9077
40 % 10 18 1520
30 % 10 18 1507
Entity #2 | Chains: R,T
DNA (5'-D(*GP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4JBM 1 A, B Interferon-inducible protein AIM2 HIN domain, UNP residues 158-349 10090