Sequence Similarity Clusters for the Entities in PDB 4JBM

Entity #1 | Chains: A,B
Interferon-inducible protein AIM2 protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42238
95 % 1 1 32052
90 % 1 1 30643
70 % 1 1 27353
50 % 1 3 8044
40 % 8 15 1718
30 % 8 16 1488
Entity #2 | Chains: R,T
DNA (5'-D(*GP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3RLO 1 A Gamma-interferon-inducible protein 16 unp residues 571-766 9606
2 4L5R 1 C Interferon-activable protein 202 HIN-200 1 10090
3 4LNQ 1 A, B Interferon-activable protein 202 UNP residues 53-245 10090
4 2OQ0 1 A, B, C, D Gamma-interferon-inducible protein Ifi-16 First HIN200 Domain 9606
5 3RLN 1 A Gamma-interferon-inducible protein 16 unp residues 571-766 9606
6 4L5Q 1 A Interferon-activable protein 202 HIN-200 1 10090
7 3RNU 1 A, B, C, D Gamma-interferon-inducible protein 16 Human IFI16 HINb (unp residues 571-766) 9606
8 4JBM 1 A, B Interferon-inducible protein AIM2 HIN domain, UNP residues 158-349 10090
9 3RN5 1 A, B, C, D Interferon-inducible protein AIM2 unp residues 144-343 9606
10 3B6Y 1 A, B Gamma-interferon-inducible protein Ifi-16 Second (C-terminal) HIN-200 domain 9606
11 3RN2 1 A, B Interferon-inducible protein AIM2 unp residues 144-343 9606
12 4QGU 1 A, B Gamma-interferon-inducible protein 16 9606
13 4JBJ 1 A, B Interferon-activable protein 202 HINa domain, UNP residues 42-242 10090
14 4L5S 1 A, B Interferon-activable protein 202 p202 HIN1, UNP residues 46-243 10090
15 4JBK 1 A, B, C, D Interferon-activable protein 202 HINa domain, UNP residues 46-242 10090