Sequence Similarity Clusters for the Entities in PDB 4JBM

Entity #1 | Chains: A,B
Interferon-inducible protein AIM2 protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43533
95 % 1 1 36529 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.3
PDBFlex
90 % 1 1 35852
70 % 1 1 31809
50 % 1 3 9006
40 % 8 16 1661
30 % 8 16 1622
Entity #2 | Chains: R,T
DNA (5'-D(*GP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4JBM 1 A, B Interferon-inducible protein AIM2 HIN domain, UNP residues 158-349 10090