Sequence Similarity Clusters for the Entities in PDB 4JBJ

Entity #1 | Chains: A,B
Interferon-activable protein 202 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 13954
95 % 4 6 6277 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 4 6 6269
70 % 4 6 6113
50 % 6 8 3624
40 % 13 16 1579
30 % 13 16 1553

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4L5R 1 C Interferon-activable protein 202 HIN-200 1 10090
2 4LNQ 1 A, B Interferon-activable protein 202 UNP residues 53-245 10090
3 2OQ0 1 A, B, C, D Gamma-interferon-inducible protein Ifi-16 First HIN200 Domain 9606
4 4L5Q 1 A Interferon-activable protein 202 HIN-200 1 10090
5 4QGU 1 A, B Gamma-interferon-inducible protein 16 9606
6 4JBJ 1 A, B Interferon-activable protein 202 HINa domain, UNP residues 42-242 10090
7 4L5S 1 A, B Interferon-activable protein 202 p202 HIN1, UNP residues 46-243 10090
8 4JBK 1 A, B, C, D Interferon-activable protein 202 HINa domain, UNP residues 46-242 10090