Sequence Similarity Clusters for the Entities in PDB 4JAP

Entity #1 | Chains: A,B,C,D
Alpha-pyrone synthesis polyketide synthase-like Pks11 protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 2438
95 % 2 6 2726 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 6 2796
70 % 2 6 2712
50 % 2 6 2699
40 % 2 6 2646
30 % 2 6 2508

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures