Sequence Similarity Clusters for the Entities in PDB 4JAP

Entity #1 | Chains: A,B,C,D
Alpha-pyrone synthesis polyketide synthase-like Pks11 protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 3129
95 % 2 6 2379 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 6 2440
70 % 2 6 2431
50 % 2 6 2416
40 % 2 6 2388
30 % 2 6 2290

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.