Sequence Similarity Clusters for the Entities in PDB 4J9Z

Entity #1 | Chains: B
Small conductance calcium-activated potassium channel protein 2 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 8109
95 % 6 11 6658 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.9
PDBFlex
90 % 6 11 6645
70 % 6 11 6439
50 % 6 11 6000
40 % 6 11 5579
30 % 6 11 4909
Entity #2 | Chains: R
Calmodulin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 186 60
95 % 17 190 79 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 22 203 77
70 % 23 205 93
50 % 23 238 105
40 % 24 361 40
30 % 33 432 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures