Sequence Similarity Clusters for the Entities in PDB 4J9Z

Entity #1 | Chains: B
Small conductance calcium-activated potassium channel protein 2 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10476
95 % 5 7 10472 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.7
PDBFlex
90 % 5 7 10335
70 % 5 7 9795
50 % 5 7 8878
40 % 5 7 8130
30 % 5 7 7156
Entity #2 | Chains: R
Calmodulin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 130 101
95 % 15 165 93 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 20 178 81
70 % 21 180 98
50 % 21 213 112
40 % 22 336 33
30 % 23 363 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.