Sequence Similarity Clusters for the Entities in PDB 4J9Z

Entity #1 | Chains: B
Small conductance calcium-activated potassium channel protein 2 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 7 10970
95 % 5 9 8147
90 % 5 9 8095
70 % 5 9 7830
50 % 5 9 7209
40 % 5 9 6700
30 % 5 9 5974
Entity #2 | Chains: R
Calmodulin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 136 102
95 % 16 173 87
90 % 21 186 87
70 % 22 188 103
50 % 22 221 113
40 % 23 344 38
30 % 24 371 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures