Sequence Similarity Clusters for the Entities in PDB 4J9Y

Entity #1 | Chains: B
Small conductance calcium-activated potassium channel protein 2 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 10711
95 % 1 7 10729 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.7
PDBFlex
90 % 1 7 10593
70 % 1 7 10064
50 % 1 7 9102
40 % 1 7 8328
30 % 1 7 7338
Entity #2 | Chains: R
Calmodulin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 131 101
95 % 9 168 91 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.8
PDBFlex
90 % 13 181 83
70 % 14 183 100
50 % 14 216 115
40 % 14 339 39
30 % 14 366 49

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.