Sequence Similarity Clusters for the Entities in PDB 4J8G

Entity #1 | Chains: A,B
coatomer subunit alpha protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 21284
95 % 2 3 19174 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 2 3 18665
70 % 2 3 17175
50 % 2 3 14972
40 % 2 3 13329
30 % 12 13 2902
Entity #2 | Chains: C,D
membrane glycoprotein E3 gp19K protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures