Sequence Similarity Clusters for the Entities in PDB 4J8G

Entity #1 | Chains: A,B
coatomer subunit alpha protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 18981
95 % 2 3 16923 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 2 3 16589
70 % 2 3 15436
50 % 2 3 13541
40 % 2 3 12163
30 % 2 3 10494
Entity #2 | Chains: C,D
membrane glycoprotein E3 gp19K protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.