Sequence Similarity Clusters for the Entities in PDB 4J8G

Entity #1 | Chains: A,B
coatomer subunit alpha protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 19463
95 % 2 3 17302 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 2 3 16962
70 % 2 3 15785
50 % 2 3 13828
40 % 2 3 12415
30 % 2 3 10709
Entity #2 | Chains: C,D
membrane glycoprotein E3 gp19K protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures