Sequence Similarity Clusters for the Entities in PDB 4J8B

Entity #1 | Chains: A
coatomer alpha subunit protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 19083
95 % 3 3 17008 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 3 3 16676
70 % 3 3 15534
50 % 3 3 13615
40 % 3 3 12226
30 % 3 3 10548
Entity #2 | Chains: B
Emp47p protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures