Sequence Similarity Clusters for the Entities in PDB 4J86

Entity #1 | Chains: A,B
Coatomer subunit beta' protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 4235
95 % 4 10 4009 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 4 10 4046
70 % 4 10 3997
50 % 4 10 3871
40 % 4 10 3703
30 % 4 10 3453
Entity #2 | Chains: C,D
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1 protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.