Sequence Similarity Clusters for the Entities in PDB 4J7M

Entity #1 | Chains: A
Protein Dom3Z protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 17813
95 % 2 4 16061 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 6 10998
70 % 2 6 10395
50 % 2 6 9392
40 % 2 6 8578
30 % 2 6 7533
Entity #2 | Chains: B
RNA (5'-R(P*UP*(U37)P*(U37)P*UP*U)-3') rna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.