Sequence Similarity Clusters for the Entities in PDB 4J7L

Entity #1 | Chains: A
Protein Dom3Z protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 18255
95 % 3 4 16456 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 3 6 11260
70 % 3 6 10655
50 % 3 6 9618
40 % 3 6 8782
30 % 3 6 7718
Entity #2 | Chains: B
RNA (5'-R(P*UP*UP*UP*UP*U)-3') rna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.