Sequence Similarity Clusters for the Entities in PDB 4J7L

Entity #1 | Chains: A
Protein Dom3Z protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 18725
95 % 3 4 16829 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 3 6 11506
70 % 3 6 10888
50 % 3 6 9826
40 % 3 6 8969
30 % 3 6 7882
Entity #2 | Chains: B
RNA (5'-R(P*UP*UP*UP*UP*U)-3') rna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures