Sequence Similarity Clusters for the Entities in PDB 4J7L

Entity #1 | Chains: A
Protein Dom3Z protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 23455
95 % 3 4 20902 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 3 6 13488
70 % 3 6 12634
50 % 3 6 11236
40 % 3 6 10092
30 % 3 6 8608
Entity #2 | Chains: B
RNA (5'-R(P*UP*UP*UP*UP*U)-3') rna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures