Sequence Similarity Clusters for the Entities in PDB 4J78

Entity #1 | Chains: A
Coatomer subunit beta' protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 4280
95 % 1 10 4045 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 1 10 4082
70 % 1 10 4023
50 % 1 10 3890
40 % 1 10 3721
30 % 1 10 3474
Entity #2 | Chains: B
Emp47p protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.