Sequence Similarity Clusters for the Entities in PDB 4J39

Entity #1 | Chains: A
RNA silencing suppressor p19 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 10117
95 % 1 9 6091
90 % 1 9 6078
70 % 1 9 5931
50 % 1 9 5565
40 % 1 9 5210
30 % 1 9 4677
Entity #2 | Chains: B
5'-R(P*CP*AP*GP*CP*AP*GP*CP*AP*GP*CP*CP*UP*GP*CP*UP*GP*CP*UP*G)-3' rna, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.