Sequence Similarity Clusters for the Entities in PDB 4J2X

Entity #1 | Chains: A,C
Recombining binding protein suppressor of hairless protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30453
95 % 3 6 7752
90 % 3 6 7714
70 % 4 7 5974
50 % 6 11 4035
40 % 6 11 3858
30 % 6 11 3570
Entity #2 | Chains: B,D
Four and a half LIM domains protein 1 protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45872
95 % 1 1 34289
90 % 1 1 32819
70 % 1 1 29381
50 % 1 1 25245
40 % 1 1 22338
30 % 1 1 18996
Entity #3 | Chains: E,G
5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3' dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: F,H
5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3' dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.