Sequence Similarity Clusters for the Entities in PDB 4J2X

Entity #1 | Chains: A,C
Recombining binding protein suppressor of hairless protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 29017
95 % 3 6 7364
90 % 3 6 7327
70 % 4 7 5696
50 % 6 11 3848
40 % 6 11 3679
30 % 6 11 3410
Entity #2 | Chains: B,D
Four and a half LIM domains protein 1 protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43860
95 % 1 1 32831
90 % 1 1 31448
70 % 1 1 28184
50 % 1 1 24253
40 % 1 1 21491
30 % 1 1 18302
Entity #3 | Chains: E,G
5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3' dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: F,H
5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3' dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.