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An Information Portal to 105097 Biological Macromolecular Structures

CSL (RBP-Jk) with corepressor KyoT2 bound to DNA
Sequence Clustering and Redundancy Reduction Results
4J2X
Sequence Clusters for the Sequence Entities in PDB 4J2X
Entity #1: Chains: A,C - Recombining binding protein suppressor of hairless protein, length: 427 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 24874
95% 3 6 6349
90% 3 6 6327
70% 3 6 6120
50% 5 10 3867
40% 5 10 3681
30% 5 10 3394
Entity #2: Chains: B,D - Four and a half LIM domains protein 1 protein, length: 28 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 37907
95% 1 1 28595
90% 1 1 27483
70% 1 1 24800
50% 1 1 21480
40% 1 1 19113
30% 1 1 16350
Entity #3: Chains: E,G - 5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3' dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: F,H - 5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3' dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.